Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903906.1_cds_XP_016454089.1_48152
CDS Infomation

[gene=LOC107778354] [db_xref=GeneID:107778354] [protein=uncharacterized protein LOC107778354 isoform X2] [protein_id=XP_016454089.1] [location=join(135628..135726,135817..135908,136683..136821,136952..137083,137213..137359,137486..137686,137774..138838,138948..139117,139246..139399)] [gbkey=CDS]
Sequence

ATGGGCGGCTACCGAGCTGTTGCTGCCGCAGTCAGCGGCGATTCTTCCAAATCCTCGGCT
GAATCTAGCTTCCGGGAACTTGATGATGTCTTTTTGCAGACTCAAACTAGAATATGGCTT
GGGGAAGTTCTGAAGATGAGGTTTGACGAGCACCTACATATTTCTGATTTGCTTGCCGAT
GGAGATCTTCTGTTTGAAGTCTCCAAAGTATTATGGAATATGCTATTGGTTAAGTGTGGC
GAGCTAAGACATTTGAAGTATGAACCACTTGGTTCACGGAGATGCAGTGGGAGATATATG
CCTTACTCTAATGTTGACTCCTTCTTGAAGATCTGCAAAATACTGGGATTAAATGGTATC
GATCTCTTCTCCCCATCAGATGTTGTTGAGAAAAAGAACATTCGTAAAGTTTGTATTTGC
ATAAGGGCACTTTCAAATAAGGCCTGTTCCAAACAATTGAAGGTTCCTGACTTTGACTTG
GTGACCTATACGGTGGTCATGCCAAAAGATATGGTAGGTGGCATTCGAAGAAGCTTGGAG
ACATCAAGCAGCCTTTCAAGTTCTTCTGGTTATTACTCGTATAAAGAAACAAGATCAAAA
CATATGGAGAGAAATAAAACCAGAGAATCTGAAGGAAACTATGATTCTTTATCTGAAGAA
TCTAACGAGGCTGAGAGCAAGTTTGTGGGAGAAGAGTCTTGTTGCTCATCTATGAATCAG
CTTGAAGATAATAACGCCACAGATTCAGATGCAGACAATTCTATTGACGAACATTCAGCT
GTTAGAAAGAATGGAAGAGAGAAAATTAGTTGTGCTAGGAATGACCGTACAGAAGATAGT
TGTTCATCAATTTGCACCAGTTCTCAATCAAGATCACATCATAGAACTTCTCGAGGAAAT
GGAGGGAAATATAGTACTACCAATGATAGGATACACTTTGATTATAGCGACCTTAACATG
GTAAATGATGAGTCAGTTGTTGGAGATTCTATGTATGACAATGACGTGGAAAGTAGTTAT
ATATCTAACTACTTAGCATTCACAGATTCAGTTATTGGTGGAACTGATGGAAGTACTCCT
GTACTGCGGAAAGGTGAAGATAATATTTTGAACCTTTTTATGGCTATTGATTCTCATGAA
CCAAATTTAAGCGAAAGGACTTCCCAAATTGGACTTCAGAATAAATTTTCTGATACTGAA
GATGCAGAGGTCTCATCAACCACTAGCATGAGCTCTGTATTATGTCGGGTGCGTGCTTTG
GATTTCGATGACCAATTTGATGCAGATGATTGTTTAACAGCAGAAACTCCTTGTGCCATG
CTGGAAAATGATGCTGATAGGCAGTATAAGTATGCATCTGCAAGTCATAATGCATTGAAT
GTTGCAACCAACGAGCTCATGTTTCATGATACTAAAGAACCTTCTATAGTAAAACCTAAA
ATTTCTGGTAGTCTCACTGAGCTGACATATTCCTGTCCAGATGGATTGCAATTTGCTGCT
AGAGAGCCTCTTACTGATAAAATTGTCTCATCGCATGGAAATAACTCAAATTATTTTGAT
GAAGAAATGGAGGCTGCTAGAAGTAAAAATAAGTTTGTTGATACTGCATGTAGAAATAAT
CTTAAGAATGTGTCTTTAGTTAACCCTAGTGAAGGATGTGATGGTGATTCACAGTATCTG
AAATTTGTTTCTGATGAAGTCAGTAGTACATGTGAACCATCCATGACTCTGGATGGTGTT
AACATGGATCAGAATTCTGTTATTTCTGCATATTATTGTGAACATATTGAAAAAGGGTTC
CCCTGTTCCTGCTCCCCTGTCTACGATTCAGGAGATGCAAGTGAAGTATGTGAACCAACA
GTTCCAGGAGATGATGGTGATACAAAACATAAAGTATCATATGTGTTGGAAGAAAATGCT
TCACCGAGGCGGCAAGAAACAGATGCTGGTCAATTAAATGACAAACATCGTCACAGGCCA
TTGCTGAAAACAGTTGCCAAAGGCACTGCACTTGTTGGTGTATTGTGTCTGTTGCTGCAT
TTCAGTCGTAGGAGAAACAAACAGGAAAACAGTGAAGCCGGCAGTAGACCAACTCAAAGT
AAGAAGTTCCGTGGCAGAGATTTCTCGTATGGGGATGGACAAAATGGACGTCGAGTAGAT
AAAGTTTATCCTTCAGAAAAACTCAAGTTCAAGAATTAG

Peptide Sequence

PEP ID

XP_016454089.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107778354 isoform X2 [Nicotiana tabacum]
Sequence

MGGYRAVAAAVSGDSSKSSAESSFRELDDVFLQTQTRIWLGEVLKMRFDEHLHISDLLAD
GDLLFEVSKVLWNMLLVKCGELRHLKYEPLGSRRCSGRYMPYSNVDSFLKICKILGLNGI
DLFSPSDVVEKKNIRKVCICIRALSNKACSKQLKVPDFDLVTYTVVMPKDMVGGIRRSLE
TSSSLSSSSGYYSYKETRSKHMERNKTRESEGNYDSLSEESNEAESKFVGEESCCSSMNQ
LEDNNATDSDADNSIDEHSAVRKNGREKISCARNDRTEDSCSSICTSSQSRSHHRTSRGN
GGKYSTTNDRIHFDYSDLNMVNDESVVGDSMYDNDVESSYISNYLAFTDSVIGGTDGSTP
VLRKGEDNILNLFMAIDSHEPNLSERTSQIGLQNKFSDTEDAEVSSTTSMSSVLCRVRAL
DFDDQFDADDCLTAETPCAMLENDADRQYKYASASHNALNVATNELMFHDTKEPSIVKPK
ISGSLTELTYSCPDGLQFAAREPLTDKIVSSHGNNSNYFDEEMEAARSKNKFVDTACRNN
LKNVSLVNPSEGCDGDSQYLKFVSDEVSSTCEPSMTLDGVNMDQNSVISAYYCEHIEKGF
PCSCSPVYDSGDASEVCEPTVPGDDGDTKHKVSYVLEENASPRRQETDAGQLNDKHRHRP
LLKTVAKGTALVGVLCLLLHFSRRRNKQENSEAGSRPTQSKKFRGRDFSYGDGQNGRRVD
KVYPSEKLKFKN

Transcript Sequence

Gene sequence data has not been registered.